Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 HMGA1P7-201ENST00000406908 502 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 PRSS29P-201ENST00000440800 595 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC073648.2-201ENST00000510116 352 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 MIR4321-201ENST00000592276 80 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 PPT1-215ENST00000641471 2368 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 AC006486.2-201ENST00000624246 2199 ntBASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01561Q8N1V8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC138035.3-201ENST00000622706 2791 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RPS2P28-201ENST00000314255 741 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC073347.1-201ENST00000421633 2643 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 FAM210CP-201ENST00000445714 574 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CXCL1P1-201ENST00000502804 216 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 KRT18P21-201ENST00000515767 1272 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ACTL9-202ENST00000612068 1252 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 AC008735.5-201ENST00000623544 497 ntBASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01561Q8N1V8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms