Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 RN7SL219P-201ENST00000582872 296 ntBASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 MIR4321-201ENST00000592276 80 ntBASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 LINC01115-203ENST00000606068 577 ntBASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEFF1Q8IYR6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 CTBP2P5-201ENST00000454986 1264 ntBASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AC233724.13-201ENST00000598383 410 ntBASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AL365330.1-201ENST00000607459 531 ntBASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 RPSAP52-203ENST00000622976 1023 ntBASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEFF1Q8IYR6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 AC006538.1-201ENST00000567905 1585 ntBASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 UBALD1-205ENST00000590891 2641 ntBASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 AD000864.1-201ENST00000624076 2295 ntBASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TMEFF1Q8IYR6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEFF1Q8IYR6 KRT8P22-201ENST00000562317 1415 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms