Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN4BQ8IWT1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC044860.1-202ENST00000559481 777 ntBASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC010336.2-201ENST00000564226 506 ntBASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AC004233.3-201ENST00000607794 1269 ntBASIC17■□□□□ 0.31
SCN4BQ8IWT1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCN4BQ8IWT1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17■□□□□ 0.31
SCN4BQ8IWT1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 AC135586.1-201ENST00000539323 574 ntBASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 MIR6069-201ENST00000620069 79 ntBASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 AC004840.1-201ENST00000636359 365 ntBASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.99■□□□□ 0.31
SCN4BQ8IWT1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms