Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 AL139384.1-201ENST00000612143 3047 ntBASIC16.62■□□□□ 0.25
CDKL3Q8IVW4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AC068587.6-202ENST00000641839 5619 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 TFAMP1-201ENST00000412727 736 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AC023274.1-201ENST00000418278 595 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 RN7SL589P-201ENST00000481268 310 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 SPTSSB-204ENST00000617024 1292 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 FLJ16779-201ENST00000612722 7638 ntBASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDKL3Q8IVW4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC040169.1-201ENST00000565382 521 ntBASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC027307.2-201ENST00000591252 911 ntBASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC008267.7-201ENST00000624570 1194 ntBASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDKL3Q8IVW4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDKL3Q8IVW4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms