Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AL359881.3-201ENST00000602640 1721 ntBASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.72□□□□□ -0.05
CROCCP3Q8IVE0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 FAM220CP-201ENST00000395253 831 ntBASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CROCCP3Q8IVE0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CROCCP3Q8IVE0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 DUX4L17-201ENST00000557360 1267 ntBASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 FAM87A-204ENST00000613235 858 ntBASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 AC027601.5-201ENST00000624065 2482 ntBASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms