Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 MIR662-201ENST00000384847 95 ntBASIC13.5□□□□□ -0.25
ZNF546Q86UE3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ATP5G1P1-201ENST00000448724 379 ntBASIC13.5□□□□□ -0.25
ZNF546Q86UE3 AL359075.1-203ENST00000462729 1002 ntBASIC13.5□□□□□ -0.25
ZNF546Q86UE3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.5□□□□□ -0.25
ZNF546Q86UE3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ZNF546Q86UE3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AC003669.1-201ENST00000334569 611 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AP002414.1-201ENST00000391405 1147 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TSPY15P-201ENST00000457163 923 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AL441883.1-201ENST00000566170 1045 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AGAP7P-201ENST00000582299 2062 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 AGAP14-201ENST00000624701 2060 ntBASIC13.49□□□□□ -0.25
ZNF546Q86UE3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF546Q86UE3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 KRT8P39-201ENST00000396270 1433 ntBASIC13.48□□□□□ -0.25
ZNF546Q86UE3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ZNF546Q86UE3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms