Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF44Q7L0R7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 MTHFR-217ENST00000641820 1569 ntBASIC15.49■□□□□ 0.07
RNF44Q7L0R7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.49■□□□□ 0.07
RNF44Q7L0R7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.49■□□□□ 0.07
RNF44Q7L0R7 AC069120.2-201ENST00000524091 540 ntBASIC15.49■□□□□ 0.07
RNF44Q7L0R7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 DUX4L27-201ENST00000554796 1261 ntBASIC15.49■□□□□ 0.07
RNF44Q7L0R7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF44Q7L0R7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 AC124067.4-201ENST00000519691 2379 ntBASIC15.48■□□□□ 0.07
RNF44Q7L0R7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 RN7SL828P-201ENST00000607615 303 ntBASIC15.48■□□□□ 0.07
RNF44Q7L0R7 AL133215.2-201ENST00000609242 977 ntBASIC15.48■□□□□ 0.07
RNF44Q7L0R7 SPDYE12P-201ENST00000618416 771 ntBASIC15.48■□□□□ 0.07
RNF44Q7L0R7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF44Q7L0R7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms