Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13CQ709C8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.21□□□□□ -0.3
VPS13CQ709C8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 DRD5P1-201ENST00000456605 1438 ntBASIC13.21□□□□□ -0.3
VPS13CQ709C8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VPS13CQ709C8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
VPS13CQ709C8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC138951.2-201ENST00000623455 1161 ntBASIC13.2□□□□□ -0.3
VPS13CQ709C8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AL096828.3-201ENST00000615354 462 ntBASIC13.2□□□□□ -0.3
VPS13CQ709C8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AGGF1P2-201ENST00000426656 2106 ntBASIC13.2□□□□□ -0.3
VPS13CQ709C8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SLC25A24P2-201ENST00000415059 510 ntBASIC13.2□□□□□ -0.3
VPS13CQ709C8 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 RPL13AP25-201ENST00000484130 612 ntBASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.2□□□□□ -0.3
VPS13CQ709C8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VPS13CQ709C8 PCDHA12-202ENST00000613593 2588 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 AC025279.2-201ENST00000569730 653 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 RPL17P11-201ENST00000417593 544 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 FNTAP2-201ENST00000430308 634 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 EIF4HP1-201ENST00000453115 687 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.19□□□□□ -0.3
VPS13CQ709C8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 RN7SL555P-201ENST00000584742 339 ntBASIC13.19□□□□□ -0.3
VPS13CQ709C8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VPS13CQ709C8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms