Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 MIR1238-201ENST00000408483 83 ntBASIC12.27□□□□□ -0.45
MRPL54Q6P161 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 AC005332.3-201ENST00000589904 676 ntBASIC12.27□□□□□ -0.45
MRPL54Q6P161 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 AC132938.5-201ENST00000624980 1813 ntBASIC12.27□□□□□ -0.45
MRPL54Q6P161 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL54Q6P161 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
MRPL54Q6P161 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AP002414.1-201ENST00000391405 1147 ntBASIC12.26□□□□□ -0.45
MRPL54Q6P161 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 EGLN1P1-201ENST00000531623 762 ntBASIC12.26□□□□□ -0.45
MRPL54Q6P161 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AL049637.2-201ENST00000641778 930 ntBASIC12.26□□□□□ -0.45
MRPL54Q6P161 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL54Q6P161 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.26□□□□□ -0.45
MRPL54Q6P161 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL54Q6P161 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MRPL54Q6P161 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms