Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 IGHV3-62-201ENST00000520057 340 ntBASIC16.99■□□□□ 0.31
RNF43Q68DV7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 AC051619.7-201ENST00000568314 623 ntBASIC16.99■□□□□ 0.31
RNF43Q68DV7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF43Q68DV7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF43Q68DV7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TUBB3P1-201ENST00000405796 1332 ntBASIC16.98■□□□□ 0.31
RNF43Q68DV7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 AC099063.4-201ENST00000641099 1602 ntBASIC16.98■□□□□ 0.31
RNF43Q68DV7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF43Q68DV7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 AC006538.1-201ENST00000567905 1585 ntBASIC16.98■□□□□ 0.31
RNF43Q68DV7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.98■□□□□ 0.31
RNF43Q68DV7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF43Q68DV7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 FAM207CP-201ENST00000443486 507 ntBASIC16.97■□□□□ 0.31
RNF43Q68DV7 KLF2P3-201ENST00000451977 1087 ntBASIC16.97■□□□□ 0.31
RNF43Q68DV7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 AC026150.2-201ENST00000564693 1156 ntBASIC16.97■□□□□ 0.31
RNF43Q68DV7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RNF43Q68DV7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF43Q68DV7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms