Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KHDC1Q4VXA5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 WASH6P-202ENST00000359512 1437 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 RPS8P6-201ENST00000426177 609 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AL161645.1-201ENST00000622716 1255 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AC105339.1-204ENST00000636249 355 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KHDC1Q4VXA5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
KHDC1Q4VXA5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KHDC1Q4VXA5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.22
KHDC1Q4VXA5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AL596087.1-201ENST00000400979 1969 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AP006288.1-201ENST00000446065 395 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 DNAJB3-202ENST00000449667 1266 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 TIMM8BP1-201ENST00000452384 211 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AC022145.2-201ENST00000598203 171 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 GPALPP1-207ENST00000611650 899 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 AL513210.1-201ENST00000629608 234 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 GGT3P-204ENST00000453783 1664 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KHDC1Q4VXA5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms