Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 AL591122.2-201ENST00000624125 1853 ntBASIC12.67□□□□□ -0.38
RAB5BP61020 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RAB5BP61020 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.67□□□□□ -0.38
RAB5BP61020 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RAB5BP61020 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 POM121L13P-201ENST00000422362 380 ntBASIC12.66□□□□□ -0.38
RAB5BP61020 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 CICP11-201ENST00000434745 2827 ntBASIC12.66□□□□□ -0.38
RAB5BP61020 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
RAB5BP61020 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 GGT3P-204ENST00000453783 1664 ntBASIC12.66□□□□□ -0.38
RAB5BP61020 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB5BP61020 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB5BP61020 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB5BP61020 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 INTS4P1-203ENST00000641008 3683 ntBASIC12.65□□□□□ -0.38
RAB5BP61020 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5BP61020 FP325330.2-201ENST00000624219 5630 ntBASIC12.65□□□□□ -0.38
RAB5BP61020 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RAB5BP61020 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5BP61020 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 AC004899.2-201ENST00000622993 3860 ntBASIC12.65□□□□□ -0.38
RAB5BP61020 CICP16-201ENST00000502609 2813 ntBASIC12.65□□□□□ -0.38
RAB5BP61020 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB5BP61020 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5BP61020 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB5BP61020 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.65□□□□□ -0.38
RAB5BP61020 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB5BP61020 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB5BP61020 AC133552.2-202ENST00000575694 574 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms