Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 AC022144.1-201ENST00000602255 1580 ntBASIC21.07■□□□□ 0.96
RIPK4P57078 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.07■□□□□ 0.96
RIPK4P57078 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RIPK4P57078 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.07■□□□□ 0.96
RIPK4P57078 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RIPK4P57078 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.07■□□□□ 0.96
RIPK4P57078 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIPK4P57078 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.06■□□□□ 0.96
RIPK4P57078 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.06■□□□□ 0.96
RIPK4P57078 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.06■□□□□ 0.96
RIPK4P57078 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 MIR661-201ENST00000384842 89 ntBASIC21.06■□□□□ 0.96
RIPK4P57078 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 FAM8A3P-201ENST00000427218 844 ntBASIC21.06■□□□□ 0.96
RIPK4P57078 EEF1DP4-201ENST00000446006 880 ntBASIC21.06■□□□□ 0.96
RIPK4P57078 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.06■□□□□ 0.96
RIPK4P57078 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.06■□□□□ 0.96
RIPK4P57078 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.06■□□□□ 0.96
RIPK4P57078 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.06■□□□□ 0.96
RIPK4P57078 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.06■□□□□ 0.96
RIPK4P57078 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIPK4P57078 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.06■□□□□ 0.96
RIPK4P57078 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RIPK4P57078 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.05■□□□□ 0.96
RIPK4P57078 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RIPK4P57078 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.05■□□□□ 0.96
RIPK4P57078 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.05■□□□□ 0.96
RIPK4P57078 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 FO393414.2-201ENST00000405153 598 ntBASIC21.05■□□□□ 0.96
RIPK4P57078 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.05■□□□□ 0.96
RIPK4P57078 TSPY16P-201ENST00000449843 468 ntBASIC21.05■□□□□ 0.96
RIPK4P57078 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 RN7SL618P-201ENST00000477850 296 ntBASIC21.05■□□□□ 0.96
RIPK4P57078 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.05■□□□□ 0.96
RIPK4P57078 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 AC008738.7-201ENST00000609744 511 ntBASIC21.05■□□□□ 0.96
RIPK4P57078 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
RIPK4P57078 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.05■□□□□ 0.96
RIPK4P57078 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RIPK4P57078 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RIPK4P57078 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RIPK4P57078 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIPK4P57078 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RIPK4P57078 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RIPK4P57078 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RIPK4P57078 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms