Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SUMO3P55854 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SUMO3P55854 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
SUMO3P55854 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SUMO3P55854 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SUMO3P55854 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 FAM86GP-201ENST00000448322 971 ntBASIC14.59□□□□□ -0.07
SUMO3P55854 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.59□□□□□ -0.07
SUMO3P55854 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.59□□□□□ -0.07
SUMO3P55854 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.59□□□□□ -0.07
SUMO3P55854 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.59□□□□□ -0.07
SUMO3P55854 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SUMO3P55854 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SUMO3P55854 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.59□□□□□ -0.07
SUMO3P55854 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
SUMO3P55854 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SUMO3P55854 CETN4P-206ENST00000642099 2168 ntBASIC14.58□□□□□ -0.07
SUMO3P55854 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SUMO3P55854 PCDHA1-201ENST00000378133 2726 ntBASIC14.58□□□□□ -0.07
SUMO3P55854 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SUMO3P55854 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SUMO3P55854 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SUMO3P55854 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 FO393414.2-201ENST00000405153 598 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.58□□□□□ -0.08
SUMO3P55854 METTL21AP1-201ENST00000438852 635 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 MTND6P24-201ENST00000440466 518 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 KLF2P3-201ENST00000451977 1087 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SUMO3P55854 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.58□□□□□ -0.08
SUMO3P55854 HLA-V-204ENST00000476601 1289 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 AC125807.1-201ENST00000483097 614 ntBASIC14.58□□□□□ -0.08
SUMO3P55854 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.58□□□□□ -0.08
SUMO3P55854 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.58□□□□□ -0.08
SUMO3P55854 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms