Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CDH15P55291 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 AL353801.3-201ENST00000609898 542 ntBASIC15.16■□□□□ 0.02
CDH15P55291 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 FLJ16779-201ENST00000612722 7638 ntBASIC15.16■□□□□ 0.02
CDH15P55291 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.16■□□□□ 0.02
CDH15P55291 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.16■□□□□ 0.02
CDH15P55291 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDH15P55291 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 LINC01101-201ENST00000622953 1884 ntBASIC15.15■□□□□ 0.02
CDH15P55291 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH15P55291 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH15P55291 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH15P55291 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH15P55291 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH15P55291 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 KRT8P49-201ENST00000604166 1432 ntBASIC15.15■□□□□ 0.02
CDH15P55291 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH15P55291 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms