Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH4P55283 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH4P55283 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH4P55283 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH4P55283 AC009477.1-201ENST00000452936 217 ntBASIC16.46■□□□□ 0.23
CDH4P55283 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 ZNF890P-202ENST00000530367 1156 ntBASIC16.46■□□□□ 0.23
CDH4P55283 AL512361.1-201ENST00000554200 418 ntBASIC16.46■□□□□ 0.23
CDH4P55283 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.46■□□□□ 0.23
CDH4P55283 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDH4P55283 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH4P55283 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.46■□□□□ 0.23
CDH4P55283 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH4P55283 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDH4P55283 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.46■□□□□ 0.22
CDH4P55283 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDH4P55283 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
CDH4P55283 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH4P55283 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 HIST3H2BA-201ENST00000436555 524 ntBASIC16.45■□□□□ 0.22
CDH4P55283 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 AC010336.2-201ENST00000564226 506 ntBASIC16.45■□□□□ 0.22
CDH4P55283 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH4P55283 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH4P55283 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.45■□□□□ 0.22
CDH4P55283 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 AC022144.1-201ENST00000602255 1580 ntBASIC16.45■□□□□ 0.22
CDH4P55283 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH4P55283 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH4P55283 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH4P55283 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH4P55283 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDH4P55283 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH4P55283 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH4P55283 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH4P55283 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH4P55283 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms