Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC099522.2-201ENST00000607001 744 ntBASIC16.31■□□□□ 0.2
LIMK2P53671 AC026120.1-201ENST00000611536 926 ntBASIC16.31■□□□□ 0.2
LIMK2P53671 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LIMK2P53671 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.31■□□□□ 0.2
LIMK2P53671 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LIMK2P53671 AC016027.1-202ENST00000607927 1699 ntBASIC16.3■□□□□ 0.2
LIMK2P53671 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 PRAL-201ENST00000624952 3286 ntBASIC16.3■□□□□ 0.2
LIMK2P53671 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LIMK2P53671 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LIMK2P53671 AC093724.1-201ENST00000448659 1027 ntBASIC16.3■□□□□ 0.2
LIMK2P53671 TIMM8BP1-201ENST00000452384 211 ntBASIC16.3■□□□□ 0.2
LIMK2P53671 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK2P53671 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK2P53671 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.3■□□□□ 0.2
LIMK2P53671 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.3■□□□□ 0.2
LIMK2P53671 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LIMK2P53671 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LIMK2P53671 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LIMK2P53671 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.29■□□□□ 0.2
LIMK2P53671 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.29■□□□□ 0.2
LIMK2P53671 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 AC109635.5-201ENST00000533593 962 ntBASIC16.29■□□□□ 0.2
LIMK2P53671 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 AC025678.2-201ENST00000562061 970 ntBASIC16.29■□□□□ 0.2
LIMK2P53671 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.29■□□□□ 0.2
LIMK2P53671 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 LINC02084-201ENST00000606069 1096 ntBASIC16.29■□□□□ 0.2
LIMK2P53671 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LIMK2P53671 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.29■□□□□ 0.2
LIMK2P53671 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.29■□□□□ 0.2
LIMK2P53671 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms