Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PDX1P52945 DGCR5-201ENST00000399539 862 ntBASIC15.67■□□□□ 0.1
PDX1P52945 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.67■□□□□ 0.1
PDX1P52945 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.67■□□□□ 0.1
PDX1P52945 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PDX1P52945 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.67■□□□□ 0.1
PDX1P52945 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.67■□□□□ 0.1
PDX1P52945 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDX1P52945 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.66■□□□□ 0.1
PDX1P52945 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.66■□□□□ 0.1
PDX1P52945 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.66■□□□□ 0.1
PDX1P52945 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PDX1P52945 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PDX1P52945 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 ATP5G2P4-201ENST00000442175 420 ntBASIC15.66■□□□□ 0.1
PDX1P52945 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.66■□□□□ 0.1
PDX1P52945 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.66■□□□□ 0.1
PDX1P52945 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.66■□□□□ 0.1
PDX1P52945 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.66■□□□□ 0.1
PDX1P52945 AC044860.1-202ENST00000559481 777 ntBASIC15.66■□□□□ 0.1
PDX1P52945 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.66■□□□□ 0.1
PDX1P52945 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
PDX1P52945 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDX1P52945 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.65■□□□□ 0.1
PDX1P52945 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PDX1P52945 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PDX1P52945 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms