Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PRKXP1-201ENST00000561423 1122 ntBASIC17.72■□□□□ 0.43
BRCA2P51587 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
BRCA2P51587 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 CYP46A4P-201ENST00000414953 267 ntBASIC17.72■□□□□ 0.43
BRCA2P51587 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.72■□□□□ 0.43
BRCA2P51587 VDAC1P7-201ENST00000462417 847 ntBASIC17.72■□□□□ 0.43
BRCA2P51587 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRCA2P51587 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCA2P51587 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCA2P51587 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.71■□□□□ 0.43
BRCA2P51587 AL645939.5-201ENST00000606834 243 ntBASIC17.71■□□□□ 0.43
BRCA2P51587 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCA2P51587 REXO1L1P-202ENST00000608646 1974 ntBASIC17.71■□□□□ 0.43
BRCA2P51587 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCA2P51587 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCA2P51587 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCA2P51587 KRT18P64-201ENST00000434946 1219 ntBASIC17.71■□□□□ 0.43
BRCA2P51587 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.71■□□□□ 0.43
BRCA2P51587 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.71■□□□□ 0.43
BRCA2P51587 ECM1P1-201ENST00000604092 1279 ntBASIC17.71■□□□□ 0.43
BRCA2P51587 RNF165-205ENST00000588679 2904 ntBASIC17.71■□□□□ 0.43
BRCA2P51587 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.71■□□□□ 0.43
BRCA2P51587 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRCA2P51587 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.71■□□□□ 0.43
BRCA2P51587 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
BRCA2P51587 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BRCA2P51587 FO393414.2-201ENST00000405153 598 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRCA2P51587 CU633904.3-201ENST00000624042 1029 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 AL138688.1-201ENST00000624851 1594 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 AC134407.2-201ENST00000625089 1978 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.7■□□□□ 0.42
BRCA2P51587 AC024681.1-201ENST00000521917 487 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
BRCA2P51587 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
BRCA2P51587 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.7■□□□□ 0.42
BRCA2P51587 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.7■□□□□ 0.42
BRCA2P51587 RN7SL736P-201ENST00000613111 269 ntBASIC17.7■□□□□ 0.42
BRCA2P51587 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BRCA2P51587 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
BRCA2P51587 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.69■□□□□ 0.42
BRCA2P51587 POM121L10P-201ENST00000436994 1285 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
BRCA2P51587 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
BRCA2P51587 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BRCA2P51587 HSPB1P2-201ENST00000448722 546 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
BRCA2P51587 AC141586.1-203ENST00000567242 366 ntBASIC17.69■□□□□ 0.42
BRCA2P51587 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.69■□□□□ 0.42
BRCA2P51587 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms