Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CXCL5P42830 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 AC211429.1-201ENST00000415277 523 ntBASIC10.97□□□□□ -0.65
CXCL5P42830 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC10.97□□□□□ -0.65
CXCL5P42830 BX005266.1-201ENST00000473402 457 ntBASIC10.97□□□□□ -0.65
CXCL5P42830 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 AC106795.1-205ENST00000512851 1056 ntBASIC10.97□□□□□ -0.65
CXCL5P42830 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.97□□□□□ -0.65
CXCL5P42830 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CXCL5P42830 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 PI4KAP1-204ENST00000612579 1703 ntBASIC10.97□□□□□ -0.65
CXCL5P42830 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.97□□□□□ -0.65
CXCL5P42830 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.97□□□□□ -0.65
CXCL5P42830 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC10.97□□□□□ -0.65
CXCL5P42830 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
CXCL5P42830 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CXCL5P42830 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 AC005089.1-201ENST00000619486 2241 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 AC129492.6-201ENST00000611383 1305 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 ARMC10P1-201ENST00000313754 855 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
CXCL5P42830 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.96□□□□□ -0.65
CXCL5P42830 TMPOP1-202ENST00000424642 1267 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC10.96□□□□□ -0.65
CXCL5P42830 AP002383.4-201ENST00000442518 975 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 ARTN-206ENST00000472435 402 ntTSL 3 BASIC10.96□□□□□ -0.65
CXCL5P42830 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.96□□□□□ -0.65
CXCL5P42830 FAM86EP-206ENST00000510506 987 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
CXCL5P42830 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 RN7SL850P-201ENST00000579959 291 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.96□□□□□ -0.65
CXCL5P42830 GGTLC5P-201ENST00000617623 998 ntBASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms