Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 NCF1C-201ENST00000438382 1427 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 AC087163.2-201ENST00000457299 853 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 AL671277.2-201ENST00000458060 996 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.42■□□□□ 0.38
CASQ1P31415 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.42■□□□□ 0.38
CASQ1P31415 NTF6B-201ENST00000591913 560 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 AC064862.7-201ENST00000604520 867 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ1P31415 AC091951.1-201ENST00000512854 2465 ntBASIC17.42■□□□□ 0.38
CASQ1P31415 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ1P31415 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ1P31415 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.41■□□□□ 0.38
CASQ1P31415 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.41■□□□□ 0.38
CASQ1P31415 AC090616.6-203ENST00000579186 1945 ntBASIC17.41■□□□□ 0.38
CASQ1P31415 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.41■□□□□ 0.38
CASQ1P31415 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.41■□□□□ 0.38
CASQ1P31415 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.41■□□□□ 0.38
CASQ1P31415 AP001350.2-201ENST00000625104 1094 ntBASIC17.41■□□□□ 0.38
CASQ1P31415 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CASQ1P31415 U82695.1-201ENST00000635752 1889 ntBASIC17.41■□□□□ 0.38
CASQ1P31415 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.41■□□□□ 0.38
CASQ1P31415 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASQ1P31415 AC233702.3-201ENST00000578656 1387 ntBASIC17.4■□□□□ 0.38
CASQ1P31415 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CASQ1P31415 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
CASQ1P31415 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.4■□□□□ 0.38
CASQ1P31415 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 AC105250.1-201ENST00000509378 2057 ntBASIC17.4■□□□□ 0.38
CASQ1P31415 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 AC026396.1-201ENST00000419388 421 ntBASIC17.4■□□□□ 0.38
CASQ1P31415 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CASQ1P31415 ABCD1P5-201ENST00000445663 754 ntBASIC17.4■□□□□ 0.38
CASQ1P31415 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.4■□□□□ 0.38
CASQ1P31415 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.4■□□□□ 0.38
CASQ1P31415 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASQ1P31415 AC087641.1-201ENST00000557561 1021 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms