Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
EPHA1P21709 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
EPHA1P21709 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.95□□□□□ -0.18
EPHA1P21709 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
EPHA1P21709 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.95□□□□□ -0.18
EPHA1P21709 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EPHA1P21709 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.94□□□□□ -0.18
EPHA1P21709 AL513480.1-201ENST00000451731 511 ntBASIC13.94□□□□□ -0.18
EPHA1P21709 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.94□□□□□ -0.18
EPHA1P21709 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
EPHA1P21709 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.94□□□□□ -0.18
EPHA1P21709 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.94□□□□□ -0.18
EPHA1P21709 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.94□□□□□ -0.18
EPHA1P21709 REXO1L3P-201ENST00000622202 1288 ntBASIC13.94□□□□□ -0.18
EPHA1P21709 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EPHA1P21709 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.94□□□□□ -0.18
EPHA1P21709 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
EPHA1P21709 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.94□□□□□ -0.18
EPHA1P21709 SBF1P1-201ENST00000444527 5631 ntBASIC13.94□□□□□ -0.18
EPHA1P21709 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.93□□□□□ -0.18
EPHA1P21709 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
EPHA1P21709 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
EPHA1P21709 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 AC112191.1-201ENST00000523689 701 ntBASIC13.93□□□□□ -0.18
EPHA1P21709 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.93□□□□□ -0.18
EPHA1P21709 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.93□□□□□ -0.18
EPHA1P21709 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 AC105339.1-204ENST00000636249 355 ntBASIC13.93□□□□□ -0.18
EPHA1P21709 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
EPHA1P21709 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
EPHA1P21709 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
EPHA1P21709 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms