Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NFKB1P19838 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.46■□□□□ 0.22
NFKB1P19838 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 FAM220BP-201ENST00000377689 816 ntBASIC16.45■□□□□ 0.22
NFKB1P19838 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 RPSAP43-201ENST00000402237 625 ntBASIC16.45■□□□□ 0.22
NFKB1P19838 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.45■□□□□ 0.22
NFKB1P19838 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
NFKB1P19838 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
NFKB1P19838 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NFKB1P19838 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NFKB1P19838 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.45■□□□□ 0.22
NFKB1P19838 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.44■□□□□ 0.22
NFKB1P19838 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.44■□□□□ 0.22
NFKB1P19838 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 AC134407.2-201ENST00000625089 1978 ntBASIC16.44■□□□□ 0.22
NFKB1P19838 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NFKB1P19838 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.44■□□□□ 0.22
NFKB1P19838 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.44■□□□□ 0.22
NFKB1P19838 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.44■□□□□ 0.22
NFKB1P19838 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NFKB1P19838 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.44■□□□□ 0.22
NFKB1P19838 MIR3687-2-201ENST00000577708 61 ntBASIC16.44■□□□□ 0.22
NFKB1P19838 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.44■□□□□ 0.22
NFKB1P19838 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.44■□□□□ 0.22
NFKB1P19838 MIR3687-1-201ENST00000614492 61 ntBASIC16.44■□□□□ 0.22
NFKB1P19838 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.44■□□□□ 0.22
NFKB1P19838 AL513210.1-201ENST00000629608 234 ntBASIC16.44■□□□□ 0.22
NFKB1P19838 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NFKB1P19838 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.44■□□□□ 0.22
NFKB1P19838 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NFKB1P19838 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.44■□□□□ 0.22
NFKB1P19838 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 AC105917.1-201ENST00000506637 2539 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms