Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD58P19256 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CD58P19256 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CD58P19256 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 PAUPAR-201ENST00000630360 2965 ntBASIC17.36■□□□□ 0.37
CD58P19256 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.36■□□□□ 0.37
CD58P19256 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
CD58P19256 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD58P19256 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.36■□□□□ 0.37
CD58P19256 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.36■□□□□ 0.37
CD58P19256 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.36■□□□□ 0.37
CD58P19256 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.36■□□□□ 0.37
CD58P19256 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.36■□□□□ 0.37
CD58P19256 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.36■□□□□ 0.37
CD58P19256 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD58P19256 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.36■□□□□ 0.37
CD58P19256 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
CD58P19256 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD58P19256 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 AP003680.1-201ENST00000598970 3660 ntBASIC17.35■□□□□ 0.37
CD58P19256 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CD58P19256 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.35■□□□□ 0.37
CD58P19256 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.35■□□□□ 0.37
CD58P19256 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 AC003101.2-201ENST00000612557 442 ntBASIC17.35■□□□□ 0.37
CD58P19256 MIR6080-201ENST00000617359 66 ntBASIC17.35■□□□□ 0.37
CD58P19256 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CD58P19256 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CD58P19256 AC007950.2-201ENST00000615045 2347 ntBASIC17.35■□□□□ 0.37
CD58P19256 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD58P19256 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD58P19256 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CD58P19256 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD58P19256 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CD58P19256 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.34■□□□□ 0.37
CD58P19256 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CD58P19256 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.34■□□□□ 0.37
CD58P19256 METTL21AP1-201ENST00000438852 635 ntBASIC17.34■□□□□ 0.37
CD58P19256 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD58P19256 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD58P19256 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms