Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AP001160.2-201ENST00000596071 487 ntBASIC16.32■□□□□ 0.2
VCLP18206 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 AC105339.1-204ENST00000636249 355 ntBASIC16.32■□□□□ 0.2
VCLP18206 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VCLP18206 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
VCLP18206 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VCLP18206 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.31■□□□□ 0.2
VCLP18206 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.31■□□□□ 0.2
VCLP18206 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.31■□□□□ 0.2
VCLP18206 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VCLP18206 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.31■□□□□ 0.2
VCLP18206 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 AL513210.1-201ENST00000629608 234 ntBASIC16.31■□□□□ 0.2
VCLP18206 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.31■□□□□ 0.2
VCLP18206 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.31■□□□□ 0.2
VCLP18206 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VCLP18206 GGT4P-201ENST00000623672 1708 ntBASIC16.31■□□□□ 0.2
VCLP18206 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 AC016027.1-202ENST00000607927 1699 ntBASIC16.3■□□□□ 0.2
VCLP18206 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VCLP18206 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.3■□□□□ 0.2
VCLP18206 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.3■□□□□ 0.2
VCLP18206 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
VCLP18206 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
VCLP18206 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VCLP18206 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VCLP18206 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
VCLP18206 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.3■□□□□ 0.2
VCLP18206 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.3■□□□□ 0.2
VCLP18206 AC020765.3-201ENST00000613051 740 ntBASIC16.3■□□□□ 0.2
VCLP18206 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms