Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CFTRP13569 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
CFTRP13569 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC26.99■■□□□ 1.91
CFTRP13569 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC26.99■■□□□ 1.91
CFTRP13569 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC26.99■■□□□ 1.91
CFTRP13569 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CFTRP13569 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC26.99■■□□□ 1.91
CFTRP13569 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CFTRP13569 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC26.98■■□□□ 1.91
CFTRP13569 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC26.98■■□□□ 1.91
CFTRP13569 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 AC148477.4-201ENST00000613430 1793 ntBASIC26.98■■□□□ 1.91
CFTRP13569 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 SNX21-203ENST00000372541 771 ntTSL 2 BASIC26.98■■□□□ 1.91
CFTRP13569 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC26.98■■□□□ 1.91
CFTRP13569 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CFTRP13569 RPL17P11-201ENST00000417593 544 ntBASIC26.98■■□□□ 1.91
CFTRP13569 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC26.98■■□□□ 1.91
CFTRP13569 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC26.98■■□□□ 1.91
CFTRP13569 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC26.98■■□□□ 1.91
CFTRP13569 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC26.98■■□□□ 1.91
CFTRP13569 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CFTRP13569 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC26.98■■□□□ 1.91
CFTRP13569 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CFTRP13569 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC26.97■■□□□ 1.91
CFTRP13569 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
CFTRP13569 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC26.97■■□□□ 1.91
CFTRP13569 AC005730.2-201ENST00000564549 1184 ntBASIC26.97■■□□□ 1.91
CFTRP13569 PRSS30P-206ENST00000641773 873 ntBASIC26.97■■□□□ 1.91
CFTRP13569 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 NEFHP1-201ENST00000412845 2629 ntBASIC26.97■■□□□ 1.91
CFTRP13569 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CFTRP13569 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CFTRP13569 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CFTRP13569 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC26.96■■□□□ 1.91
CFTRP13569 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC26.96■■□□□ 1.91
CFTRP13569 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC26.96■■□□□ 1.91
CFTRP13569 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
CFTRP13569 FGFR3P5-201ENST00000564496 886 ntBASIC26.96■■□□□ 1.91
CFTRP13569 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CFTRP13569 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
CFTRP13569 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC26.96■■□□□ 1.91
CFTRP13569 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC26.96■■□□□ 1.91
CFTRP13569 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CFTRP13569 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
CFTRP13569 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
CFTRP13569 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.91
CFTRP13569 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
CFTRP13569 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC26.95■■□□□ 1.91
CFTRP13569 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC26.95■■□□□ 1.91
CFTRP13569 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC26.95■■□□□ 1.91
CFTRP13569 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC26.95■■□□□ 1.91
CFTRP13569 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CFTRP13569 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC26.95■■□□□ 1.91
CFTRP13569 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
CFTRP13569 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC26.95■■□□□ 1.9
CFTRP13569 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC26.95■■□□□ 1.9
CFTRP13569 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
CFTRP13569 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC26.95■■□□□ 1.9
CFTRP13569 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC26.94■■□□□ 1.9
CFTRP13569 MAGEA5-201ENST00000446757 942 ntBASIC26.94■■□□□ 1.9
CFTRP13569 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC26.94■■□□□ 1.9
CFTRP13569 MBP-227ENST00000526111 581 ntTSL 4 BASIC26.94■■□□□ 1.9
CFTRP13569 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC26.94■■□□□ 1.9
CFTRP13569 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms