Protein–RNA interactions for Protein: P0DMW3

SMIM10L1, Small integral membrane protein 10-like protein 1, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM10L1P0DMW3 LINC02199-201ENST00000506655 2702 ntBASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AC009477.1-201ENST00000452936 217 ntBASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AC004890.2-204ENST00000481968 304 ntBASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.11■□□□□ 0.01
SMIM10L1P0DMW3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC025048.3-201ENST00000590609 569 ntBASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC005702.4-201ENST00000618393 416 ntBASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 Z97205.2-201ENST00000564697 1639 ntBASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SMIM10L1P0DMW3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SMIM10L1P0DMW3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms