Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AC245100.5-201ENST00000452108 331 ntBASIC15.66■□□□□ 0.1
SP9P0CG40 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 AC134698.3-201ENST00000523880 214 ntBASIC15.66■□□□□ 0.1
SP9P0CG40 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.66■□□□□ 0.1
SP9P0CG40 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.66■□□□□ 0.1
SP9P0CG40 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SP9P0CG40 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.66■□□□□ 0.1
SP9P0CG40 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SP9P0CG40 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SP9P0CG40 KRT8P35-201ENST00000483942 1338 ntBASIC15.66■□□□□ 0.1
SP9P0CG40 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SP9P0CG40 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SP9P0CG40 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.65■□□□□ 0.1
SP9P0CG40 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.65■□□□□ 0.1
SP9P0CG40 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SP9P0CG40 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SP9P0CG40 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 FGFR3P5-201ENST00000564496 886 ntBASIC15.65■□□□□ 0.1
SP9P0CG40 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 AC079336.7-201ENST00000623428 1078 ntBASIC15.65■□□□□ 0.1
SP9P0CG40 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.65■□□□□ 0.1
SP9P0CG40 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SP9P0CG40 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SP9P0CG40 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SP9P0CG40 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
SP9P0CG40 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 AC008764.6-201ENST00000595909 2069 ntBASIC15.64■□□□□ 0.09
SP9P0CG40 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.64■□□□□ 0.09
SP9P0CG40 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 NKAIN1P1-201ENST00000435754 582 ntBASIC15.64■□□□□ 0.09
SP9P0CG40 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.64■□□□□ 0.09
SP9P0CG40 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.64■□□□□ 0.09
SP9P0CG40 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
SP9P0CG40 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.64■□□□□ 0.09
SP9P0CG40 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SP9P0CG40 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms