Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM2P07951 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM2P07951 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TPM2P07951 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TPM2P07951 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TPM2P07951 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TPM2P07951 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.49■□□□□ 0.55
TPM2P07951 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TPM2P07951 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM2P07951 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 AC007686.3-201ENST00000619017 3487 ntBASIC18.48■□□□□ 0.55
TPM2P07951 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM2P07951 TOP3BP1-201ENST00000420768 1380 ntBASIC18.48■□□□□ 0.55
TPM2P07951 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM2P07951 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
TPM2P07951 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.48■□□□□ 0.55
TPM2P07951 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM2P07951 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM2P07951 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 AP001269.4-201ENST00000609611 512 ntBASIC18.48■□□□□ 0.55
TPM2P07951 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM2P07951 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.48■□□□□ 0.55
TPM2P07951 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TPM2P07951 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.48■□□□□ 0.55
TPM2P07951 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TPM2P07951 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TPM2P07951 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TPM2P07951 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TPM2P07951 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 AC009090.5-201ENST00000624886 2285 ntBASIC18.47■□□□□ 0.55
TPM2P07951 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 RBM17P3-201ENST00000417687 1192 ntBASIC18.47■□□□□ 0.55
TPM2P07951 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.47■□□□□ 0.55
TPM2P07951 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 AL589182.2-201ENST00000619332 1049 ntBASIC18.47■□□□□ 0.55
TPM2P07951 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TPM2P07951 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
TPM2P07951 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TPM2P07951 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TPM2P07951 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.46■□□□□ 0.55
TPM2P07951 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.46■□□□□ 0.55
TPM2P07951 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TPM2P07951 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.46■□□□□ 0.55
TPM2P07951 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms