Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 AC016734.2-201ENST00000624325 1377 ntBASIC13.76□□□□□ -0.21
CD3DP04234 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
CD3DP04234 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.76□□□□□ -0.21
CD3DP04234 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 AL596275.1-201ENST00000423464 877 ntBASIC13.76□□□□□ -0.21
CD3DP04234 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.76□□□□□ -0.21
CD3DP04234 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.76□□□□□ -0.21
CD3DP04234 AL139424.1-201ENST00000607572 797 ntBASIC13.76□□□□□ -0.21
CD3DP04234 AC012306.2-201ENST00000609350 630 ntBASIC13.76□□□□□ -0.21
CD3DP04234 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.76□□□□□ -0.21
CD3DP04234 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.76□□□□□ -0.21
CD3DP04234 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.76□□□□□ -0.21
CD3DP04234 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD3DP04234 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.75□□□□□ -0.21
CD3DP04234 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.75□□□□□ -0.21
CD3DP04234 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.75□□□□□ -0.21
CD3DP04234 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.75□□□□□ -0.21
CD3DP04234 AF228730.7-201ENST00000641842 219 ntBASIC13.75□□□□□ -0.21
CD3DP04234 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.75□□□□□ -0.21
CD3DP04234 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 LINC00528-201ENST00000600723 2160 ntBASIC13.75□□□□□ -0.21
CD3DP04234 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CD3DP04234 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CD3DP04234 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.74□□□□□ -0.21
CD3DP04234 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 AC112693.3-201ENST00000624819 1983 ntBASIC13.74□□□□□ -0.21
CD3DP04234 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.74□□□□□ -0.21
CD3DP04234 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.74□□□□□ -0.21
CD3DP04234 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CD3DP04234 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CD3DP04234 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
CD3DP04234 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD3DP04234 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD3DP04234 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms