Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCRP04035 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HMGCRP04035 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGCRP04035 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCRP04035 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HMGCRP04035 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCRP04035 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCRP04035 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCRP04035 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
HMGCRP04035 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.08■□□□□ 0.49
HMGCRP04035 INTS4P2-202ENST00000614726 2019 ntBASIC18.08■□□□□ 0.49
HMGCRP04035 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCRP04035 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCRP04035 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGCRP04035 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGCRP04035 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
HMGCRP04035 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCRP04035 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 RPL13AP25-201ENST00000484130 612 ntBASIC18.08■□□□□ 0.48
HMGCRP04035 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCRP04035 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGCRP04035 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCRP04035 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.08■□□□□ 0.48
HMGCRP04035 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HMGCRP04035 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGCRP04035 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCRP04035 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HMGCRP04035 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 AL645728.1-201ENST00000366221 2101 ntBASIC18.07■□□□□ 0.48
HMGCRP04035 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCRP04035 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 FTH1P14-201ENST00000482930 551 ntBASIC18.07■□□□□ 0.48
HMGCRP04035 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCRP04035 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCRP04035 AC009486.1-201ENST00000569860 813 ntBASIC18.07■□□□□ 0.48
HMGCRP04035 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.07■□□□□ 0.48
HMGCRP04035 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 AC009542.2-202ENST00000619004 1067 ntBASIC18.07■□□□□ 0.48
HMGCRP04035 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HMGCRP04035 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGCRP04035 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCRP04035 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HMGCRP04035 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCRP04035 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGCRP04035 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 PCDHA12-202ENST00000613593 2588 ntBASIC18.06■□□□□ 0.48
HMGCRP04035 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HMGCRP04035 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGCRP04035 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCRP04035 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
HMGCRP04035 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
HMGCRP04035 RPL13AP20-201ENST00000459725 609 ntBASIC18.06■□□□□ 0.48
HMGCRP04035 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 ZNF767P-206ENST00000513792 565 ntBASIC18.06■□□□□ 0.48
HMGCRP04035 RN7SL560P-201ENST00000577943 264 ntBASIC18.06■□□□□ 0.48
HMGCRP04035 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGCRP04035 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCRP04035 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.06■□□□□ 0.48
HMGCRP04035 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGCRP04035 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCRP04035 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms