Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
IFNA1P01562 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
IFNA1P01562 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.85□□□□□ -0.35
IFNA1P01562 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 SNX33P1-201ENST00000592116 1762 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 AC131212.3-201ENST00000624087 4219 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
IFNA1P01562 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
IFNA1P01562 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 HMGA1P5-201ENST00000412453 271 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 HLA-F-220ENST00000434407 884 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.84□□□□□ -0.35
IFNA1P01562 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 AP003071.4-201ENST00000562276 1284 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.84□□□□□ -0.35
IFNA1P01562 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.84□□□□□ -0.35
IFNA1P01562 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 AC010654.1-201ENST00000615722 808 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 AC125634.1-201ENST00000438758 1403 ntBASIC12.84□□□□□ -0.35
IFNA1P01562 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
IFNA1P01562 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
IFNA1P01562 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
IFNA1P01562 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.84□□□□□ -0.35
IFNA1P01562 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
IFNA1P01562 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
IFNA1P01562 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
IFNA1P01562 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.83□□□□□ -0.35
IFNA1P01562 C8orf49-201ENST00000525043 1968 ntBASIC12.83□□□□□ -0.35
IFNA1P01562 AC132938.5-201ENST00000624980 1813 ntBASIC12.83□□□□□ -0.35
IFNA1P01562 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.83□□□□□ -0.35
IFNA1P01562 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
IFNA1P01562 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
IFNA1P01562 AC012618.2-201ENST00000428058 849 ntBASIC12.83□□□□□ -0.36
IFNA1P01562 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
IFNA1P01562 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.83□□□□□ -0.36
IFNA1P01562 GCSHP2-201ENST00000560971 527 ntBASIC12.83□□□□□ -0.36
IFNA1P01562 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms