Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 AC092658.1-201ENST00000505836 891 ntBASIC13.59□□□□□ -0.23
ABCA1O95477 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.59□□□□□ -0.23
ABCA1O95477 AC004790.1-201ENST00000612686 536 ntBASIC13.59□□□□□ -0.23
ABCA1O95477 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ABCA1O95477 AL035456.1-201ENST00000456064 1369 ntBASIC13.58□□□□□ -0.23
ABCA1O95477 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ABCA1O95477 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.58□□□□□ -0.23
ABCA1O95477 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ABCA1O95477 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ABCA1O95477 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ABCA1O95477 AC116353.5-201ENST00000638148 1699 ntBASIC13.58□□□□□ -0.24
ABCA1O95477 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ABCA1O95477 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ABCA1O95477 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.58□□□□□ -0.24
ABCA1O95477 AC098850.1-201ENST00000419919 790 ntBASIC13.58□□□□□ -0.24
ABCA1O95477 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.58□□□□□ -0.24
ABCA1O95477 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 MIR4538-201ENST00000581377 78 ntBASIC13.58□□□□□ -0.24
ABCA1O95477 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ABCA1O95477 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ABCA1O95477 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ABCA1O95477 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ABCA1O95477 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.57□□□□□ -0.24
ABCA1O95477 AL512361.1-201ENST00000554200 418 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 AP005482.1-201ENST00000563722 1273 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ABCA1O95477 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 FLJ38576-201ENST00000623820 2459 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 KRT8P12-202ENST00000472924 1397 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ABCA1O95477 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 MIR658-201ENST00000385210 100 ntBASIC13.57□□□□□ -0.24
ABCA1O95477 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.57□□□□□ -0.24
ABCA1O95477 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.57□□□□□ -0.24
ABCA1O95477 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ABCA1O95477 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.57□□□□□ -0.24
ABCA1O95477 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.57□□□□□ -0.24
ABCA1O95477 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms