Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC104784.1-201ENST00000473096 294 ntBASIC23.74■■□□□ 1.39
RAPGEF3O95398 SERPINA13P-202ENST00000478994 924 ntBASIC23.74■■□□□ 1.39
RAPGEF3O95398 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC23.74■■□□□ 1.39
RAPGEF3O95398 AC007663.3-201ENST00000609632 465 ntBASIC23.74■■□□□ 1.39
RAPGEF3O95398 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RAPGEF3O95398 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC23.74■■□□□ 1.39
RAPGEF3O95398 CYP2AB1P-202ENST00000454440 1456 ntBASIC23.74■■□□□ 1.39
RAPGEF3O95398 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAPGEF3O95398 PP12613-201ENST00000424958 2230 ntBASIC23.74■■□□□ 1.39
RAPGEF3O95398 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 SMS-201ENST00000379404 1174 ntTSL 3 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 RN7SL11P-201ENST00000471305 293 ntBASIC23.73■■□□□ 1.39
RAPGEF3O95398 GAPDHP40-201ENST00000505218 1006 ntBASIC23.73■■□□□ 1.39
RAPGEF3O95398 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RAPGEF3O95398 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RAPGEF3O95398 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF3O95398 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF3O95398 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF3O95398 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 SUPT4H1P2-201ENST00000501248 353 ntBASIC23.72■■□□□ 1.39
RAPGEF3O95398 AC097359.3-201ENST00000603982 1210 ntBASIC23.72■■□□□ 1.39
RAPGEF3O95398 AC026740.1-201ENST00000607068 791 ntBASIC23.72■■□□□ 1.39
RAPGEF3O95398 AF254983.2-201ENST00000612331 135 ntBASIC23.72■■□□□ 1.39
RAPGEF3O95398 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF3O95398 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RAPGEF3O95398 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 REXO1L1P-202ENST00000608646 1974 ntBASIC23.72■■□□□ 1.39
RAPGEF3O95398 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RAPGEF3O95398 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 AL354989.2-201ENST00000435838 1540 ntBASIC23.71■■□□□ 1.39
RAPGEF3O95398 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 AC008132.1-202ENST00000342005 1389 ntBASIC23.71■■□□□ 1.39
RAPGEF3O95398 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 AL353726.2-201ENST00000623259 884 ntBASIC23.71■■□□□ 1.39
RAPGEF3O95398 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF3O95398 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF3O95398 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC23.7■■□□□ 1.39
RAPGEF3O95398 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC23.7■■□□□ 1.39
RAPGEF3O95398 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
RAPGEF3O95398 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RAPGEF3O95398 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
RAPGEF3O95398 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms