Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.28■□□□□ 0.2
GPC4O75487 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.28■□□□□ 0.2
GPC4O75487 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GPC4O75487 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
GPC4O75487 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GPC4O75487 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GPC4O75487 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
GPC4O75487 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GPC4O75487 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GPC4O75487 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GPC4O75487 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
GPC4O75487 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 AC002056.1-201ENST00000395613 760 ntBASIC16.27■□□□□ 0.2
GPC4O75487 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.27■□□□□ 0.2
GPC4O75487 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GPC4O75487 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.27■□□□□ 0.2
GPC4O75487 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.27■□□□□ 0.2
GPC4O75487 AC020765.3-201ENST00000613051 740 ntBASIC16.27■□□□□ 0.2
GPC4O75487 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GPC4O75487 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GPC4O75487 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.27■□□□□ 0.2
GPC4O75487 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GPC4O75487 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.27■□□□□ 0.19
GPC4O75487 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GPC4O75487 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.27■□□□□ 0.19
GPC4O75487 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GPC4O75487 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
GPC4O75487 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GPC4O75487 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GPC4O75487 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GPC4O75487 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.26■□□□□ 0.19
GPC4O75487 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC4O75487 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.26■□□□□ 0.19
GPC4O75487 AC112191.1-201ENST00000523689 701 ntBASIC16.26■□□□□ 0.19
GPC4O75487 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.26■□□□□ 0.19
GPC4O75487 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC4O75487 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.26■□□□□ 0.19
GPC4O75487 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.26■□□□□ 0.19
GPC4O75487 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.26■□□□□ 0.19
GPC4O75487 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.26■□□□□ 0.19
GPC4O75487 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GPC4O75487 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms