Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZNF253O75346 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF253O75346 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF253O75346 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF253O75346 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF253O75346 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF253O75346 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF253O75346 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF253O75346 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.67□□□□□ -0.38
ZNF253O75346 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 AC087163.2-201ENST00000457299 853 ntBASIC12.67□□□□□ -0.38
ZNF253O75346 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF253O75346 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.67□□□□□ -0.38
ZNF253O75346 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 AP001350.2-201ENST00000625104 1094 ntBASIC12.67□□□□□ -0.38
ZNF253O75346 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 GRK6P1-201ENST00000400595 1711 ntBASIC12.67□□□□□ -0.38
ZNF253O75346 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF253O75346 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 AL671710.1-201ENST00000610245 2349 ntBASIC12.67□□□□□ -0.38
ZNF253O75346 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ZNF253O75346 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF253O75346 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ZNF253O75346 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 AL353732.1-201ENST00000569618 1459 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ZNF253O75346 PCGF3-213ENST00000620529 1899 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 AC067750.1-201ENST00000608826 6545 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.66□□□□□ -0.38
ZNF253O75346 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 AC132008.2-207ENST00000454517 770 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF253O75346 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF253O75346 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF253O75346 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms