Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 TIMM8BP1-201ENST00000452384 211 ntBASIC15.18■□□□□ 0.02
HCN1O60741 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.18■□□□□ 0.02
HCN1O60741 MPDU1-223ENST00000582151 728 ntBASIC15.18■□□□□ 0.02
HCN1O60741 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCN1O60741 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 AC092384.3-202ENST00000564646 2873 ntBASIC15.18■□□□□ 0.02
HCN1O60741 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
HCN1O60741 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCN1O60741 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
HCN1O60741 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.17■□□□□ 0.02
HCN1O60741 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HCN1O60741 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.17■□□□□ 0.02
HCN1O60741 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PMS2P4-201ENST00000412466 1052 ntBASIC15.17■□□□□ 0.02
HCN1O60741 TFAMP1-201ENST00000412727 736 ntBASIC15.17■□□□□ 0.02
HCN1O60741 AC092474.2-201ENST00000424288 719 ntBASIC15.17■□□□□ 0.02
HCN1O60741 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 AC023141.5-201ENST00000458585 616 ntBASIC15.17■□□□□ 0.02
HCN1O60741 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.17■□□□□ 0.02
HCN1O60741 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.17■□□□□ 0.02
HCN1O60741 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 AL136379.1-201ENST00000623471 2642 ntBASIC15.17■□□□□ 0.02
HCN1O60741 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 AC131009.4-201ENST00000624048 1740 ntBASIC15.17■□□□□ 0.02
HCN1O60741 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HCN1O60741 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.17■□□□□ 0.02
HCN1O60741 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCN1O60741 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HCN1O60741 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
HCN1O60741 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
HCN1O60741 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HCN1O60741 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.16■□□□□ 0.02
HCN1O60741 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.16■□□□□ 0.02
HCN1O60741 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.16■□□□□ 0.02
HCN1O60741 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.16■□□□□ 0.02
HCN1O60741 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCN1O60741 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms