Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 AC236430.1-201ENST00000402231 743 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FOXS1O43638 AC002472.2-201ENST00000442739 958 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXS1O43638 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXS1O43638 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXS1O43638 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXS1O43638 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXS1O43638 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXS1O43638 AC069224.1-201ENST00000566372 1715 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 MIR3197-201ENST00000582241 73 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 AC025048.3-201ENST00000590609 569 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXS1O43638 AC005702.4-201ENST00000618393 416 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXS1O43638 REXO1L1P-202ENST00000608646 1974 ntBASIC15.13■□□□□ 0.01
FOXS1O43638 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXS1O43638 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXS1O43638 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXS1O43638 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
FOXS1O43638 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXS1O43638 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXS1O43638 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXS1O43638 FAM207CP-201ENST00000443486 507 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXS1O43638 SERBP1P5-201ENST00000510079 1181 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXS1O43638 SDHAP3-202ENST00000515467 728 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXS1O43638 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXS1O43638 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 LINC02560-201ENST00000596379 459 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 BTBD7P1-201ENST00000447253 1453 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXS1O43638 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXS1O43638 CDC14C-201ENST00000428251 1719 ntBASIC15.12■□□□□ 0.01
FOXS1O43638 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXS1O43638 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXS1O43638 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
FOXS1O43638 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXS1O43638 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXS1O43638 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms