Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.62□□□□□ -0.55
PAX4O43316 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 POU5F1P6-201ENST00000466990 990 ntBASIC11.62□□□□□ -0.55
PAX4O43316 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.62□□□□□ -0.55
PAX4O43316 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.62□□□□□ -0.55
PAX4O43316 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.62□□□□□ -0.55
PAX4O43316 AP002472.1-201ENST00000577490 586 ntBASIC11.62□□□□□ -0.55
PAX4O43316 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.62□□□□□ -0.55
PAX4O43316 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
PAX4O43316 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
PAX4O43316 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.62□□□□□ -0.55
PAX4O43316 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.62□□□□□ -0.55
PAX4O43316 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PAX4O43316 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.61□□□□□ -0.55
PAX4O43316 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.61□□□□□ -0.55
PAX4O43316 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.61□□□□□ -0.55
PAX4O43316 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 AC004832.2-201ENST00000426397 482 ntBASIC11.61□□□□□ -0.55
PAX4O43316 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 FAM58CP-201ENST00000435741 640 ntBASIC11.61□□□□□ -0.55
PAX4O43316 AP000347.1-202ENST00000435868 847 ntBASIC11.61□□□□□ -0.55
PAX4O43316 DNAJB3-201ENST00000446806 729 ntBASIC11.61□□□□□ -0.55
PAX4O43316 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
PAX4O43316 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.61□□□□□ -0.55
PAX4O43316 AC009712.1-201ENST00000564938 316 ntBASIC11.61□□□□□ -0.55
PAX4O43316 MIR3687-2-201ENST00000577708 61 ntBASIC11.61□□□□□ -0.55
PAX4O43316 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 MIR3687-1-201ENST00000614492 61 ntBASIC11.61□□□□□ -0.55
PAX4O43316 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.61□□□□□ -0.55
PAX4O43316 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 PCDHA1-201ENST00000378133 2726 ntBASIC11.61□□□□□ -0.55
PAX4O43316 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.61□□□□□ -0.55
PAX4O43316 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
PAX4O43316 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PAX4O43316 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms