Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTL8CO15255 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RTL8CO15255 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.73□□□□□ -0.69
RTL8CO15255 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.73□□□□□ -0.69
RTL8CO15255 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC10.73□□□□□ -0.69
RTL8CO15255 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RTL8CO15255 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 LBX2-201ENST00000341396 886 ntTSL 3 BASIC10.72□□□□□ -0.69
RTL8CO15255 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RTL8CO15255 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 HAUS4P1-201ENST00000406739 1145 ntBASIC10.72□□□□□ -0.69
RTL8CO15255 AC099336.1-201ENST00000417053 1171 ntBASIC10.72□□□□□ -0.69
RTL8CO15255 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.72□□□□□ -0.69
RTL8CO15255 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
RTL8CO15255 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.72□□□□□ -0.69
RTL8CO15255 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.72□□□□□ -0.69
RTL8CO15255 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.72□□□□□ -0.69
RTL8CO15255 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 AC139713.2-201ENST00000641328 2723 ntBASIC10.72□□□□□ -0.69
RTL8CO15255 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
RTL8CO15255 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 AL512652.2-201ENST00000625156 1716 ntBASIC10.72□□□□□ -0.69
RTL8CO15255 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RTL8CO15255 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RTL8CO15255 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
RTL8CO15255 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
RTL8CO15255 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
RTL8CO15255 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms