Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.74□□□□□ -0.05
NPIPA2E9PIF3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 ME2P1-201ENST00000426028 1970 ntBASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 AC239800.4-201ENST00000603712 296 ntBASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 CETN4P-206ENST00000642099 2168 ntBASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA2E9PIF3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 HLA-V-204ENST00000476601 1289 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC105021.1-202ENST00000570572 669 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 RN7SL828P-201ENST00000607615 303 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AF228730.6-201ENST00000641497 218 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC084121.3-201ENST00000641716 218 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC105233.6-201ENST00000642093 218 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms