Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.39□□□□□ -0.43
COLCA2A8K830 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
COLCA2A8K830 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
COLCA2A8K830 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
COLCA2A8K830 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COLCA2A8K830 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
COLCA2A8K830 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COLCA2A8K830 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
COLCA2A8K830 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
COLCA2A8K830 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
COLCA2A8K830 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
COLCA2A8K830 CR769767.2-201ENST00000622735 460 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 AC114271.1-201ENST00000612689 2813 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 FSCN1P1-201ENST00000568912 1481 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
COLCA2A8K830 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 AC004241.5-201ENST00000623870 2448 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 AC020658.7-201ENST00000624274 2442 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.38□□□□□ -0.43
COLCA2A8K830 GPAA1P2-202ENST00000606848 1787 ntBASIC12.38□□□□□ -0.43
COLCA2A8K830 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
COLCA2A8K830 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COLCA2A8K830 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
COLCA2A8K830 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
COLCA2A8K830 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.37□□□□□ -0.43
COLCA2A8K830 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
COLCA2A8K830 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
COLCA2A8K830 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
COLCA2A8K830 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.37□□□□□ -0.43
COLCA2A8K830 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COLCA2A8K830 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms