Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC004790.1-201ENST00000612686 536 ntBASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AL691432.1-201ENST00000596308 1422 ntBASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 SLC7A15P-201ENST00000424028 1363 ntBASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 MEP1AP4-201ENST00000423244 1087 ntBASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 AC008494.3-201ENST00000606615 944 ntBASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TBC1D3FA6NER0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC004987.2-201ENST00000395959 1148 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AP006294.1-201ENST00000415407 339 ntBASIC16.03■□□□□ 0.16
TBC1D3FA6NER0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms