Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 VN2R19P-201ENST00000442399 1052 ntBASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC002347.1-201ENST00000569543 541 ntBASIC17.19■□□□□ 0.34
RCCD1A6NED2 MIR4321-201ENST00000592276 80 ntBASIC17.19■□□□□ 0.34
RCCD1A6NED2 MIR7706-201ENST00000613747 67 ntBASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC010507.1-201ENST00000633895 436 ntBASIC17.19■□□□□ 0.34
RCCD1A6NED2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RCCD1A6NED2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RCCD1A6NED2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 HCG4B-203ENST00000450128 991 ntBASIC17.18■□□□□ 0.34
RCCD1A6NED2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 AL365330.1-201ENST00000607459 531 ntBASIC17.18■□□□□ 0.34
RCCD1A6NED2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RCCD1A6NED2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
RCCD1A6NED2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 AC023908.3-201ENST00000564211 3047 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 AC009947.1-201ENST00000444350 727 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 AC079781.3-201ENST00000449110 356 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 AF186996.4-201ENST00000467186 377 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 KRT18P34-201ENST00000488218 1270 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 KRT18P56-201ENST00000507275 550 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 AL691432.3-201ENST00000621860 400 ntBASIC17.17■□□□□ 0.34
RCCD1A6NED2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RCCD1A6NED2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms