Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 MMP23A-201ENST00000234610 1017 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AL845331.1-201ENST00000424978 1190 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AC011467.2-201ENST00000598425 242 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC00552-201ENST00000625151 2579 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AC091951.1-201ENST00000512854 2465 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AL390755.1-201ENST00000623716 2027 ntBASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MAP1LC3B2A6NCE7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC01568-207ENST00000641790 1380 ntBASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 PMPCAP1-201ENST00000508114 1576 ntBASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AC013726.1-201ENST00000563747 2285 ntBASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
MAP1LC3B2A6NCE7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms