Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC66A2RUB6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 PCDHA3-202ENST00000532566 4594 ntBASIC17.6■□□□□ 0.41
CCDC66A2RUB6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC66A2RUB6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 FOSL1P1-201ENST00000511041 816 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AC139887.3-201ENST00000568585 713 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 MIR4492-201ENST00000581627 80 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 MPDU1-223ENST00000582151 728 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AF228730.7-201ENST00000641842 219 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 AL671710.1-201ENST00000610245 2349 ntBASIC17.59■□□□□ 0.41
CCDC66A2RUB6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC66A2RUB6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms