Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
DUXBA0A1W2PPF3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC090616.6-203ENST00000579186 1945 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC132008.2-207ENST00000454517 770 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 FAM86EP-206ENST00000510506 987 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 OR2I1P-210ENST00000642037 4691 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 AL009178.2-201ENST00000597278 2719 ntBASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.23□□□□□ -0.29
DUXBA0A1W2PPF3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 CICP13-201ENST00000422015 2789 ntBASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.22□□□□□ -0.29
DUXBA0A1W2PPF3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms