Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLIC4Q9Y696 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.44■□□□□ 0.54
CLIC4Q9Y696 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AC098859.1-201ENST00000502915 1238 ntBASIC18.44■□□□□ 0.54
CLIC4Q9Y696 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AC243562.1-201ENST00000560672 389 ntBASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 AKAP8P1-201ENST00000434743 1349 ntBASIC18.44■□□□□ 0.54
CLIC4Q9Y696 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.44■□□□□ 0.54
CLIC4Q9Y696 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 SSR4P1-203ENST00000599569 2260 ntBASIC18.43■□□□□ 0.54
CLIC4Q9Y696 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AC018892.3-201ENST00000623986 2499 ntBASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AC142381.1-201ENST00000426099 345 ntBASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AC105233.2-201ENST00000523697 349 ntBASIC18.43■□□□□ 0.54
CLIC4Q9Y696 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AF228730.5-201ENST00000530288 346 ntBASIC18.43■□□□□ 0.54
CLIC4Q9Y696 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLIC4Q9Y696 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLIC4Q9Y696 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms