Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 AC073439.1-201ENST00000624121 1774 ntBASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA11Q9Y5H2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.74■□□□□ 0.11
PCDHGA11Q9Y5H2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AC010491.1-201ENST00000563101 2797 ntBASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA11Q9Y5H2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 PMS2P7-201ENST00000506558 1336 ntBASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGA11Q9Y5H2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms