Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 PCDHB17P-201ENST00000539533 2393 ntBASIC18.09■□□□□ 0.49
TRIM17Q9Y577 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 AC097724.1-201ENST00000609581 426 ntBASIC18.09■□□□□ 0.49
TRIM17Q9Y577 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM17Q9Y577 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 AC092053.1-201ENST00000605787 1936 ntBASIC18.08■□□□□ 0.49
TRIM17Q9Y577 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM17Q9Y577 U82695.1-201ENST00000635752 1889 ntBASIC18.08■□□□□ 0.49
TRIM17Q9Y577 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.08■□□□□ 0.48
TRIM17Q9Y577 TOMM22P5-201ENST00000416399 439 ntBASIC18.08■□□□□ 0.48
TRIM17Q9Y577 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.08■□□□□ 0.48
TRIM17Q9Y577 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 AC245884.6-201ENST00000515672 1067 ntBASIC18.08■□□□□ 0.48
TRIM17Q9Y577 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM17Q9Y577 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AL031731.1-201ENST00000642131 2094 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 RPL17P11-201ENST00000417593 544 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AL451050.2-201ENST00000606967 682 ntBASIC18.07■□□□□ 0.48
TRIM17Q9Y577 AL096828.3-201ENST00000615354 462 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms